Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PAX4O43316 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.69■□□□□ 0.1
PAX4O43316 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.69■□□□□ 0.1
PAX4O43316 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PAX4O43316 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.69■□□□□ 0.1
PAX4O43316 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.69■□□□□ 0.1
PAX4O43316 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PAX4O43316 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PAX4O43316 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 AL353803.4-201ENST00000565882 1934 ntBASIC15.68■□□□□ 0.1
PAX4O43316 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PAX4O43316 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.68■□□□□ 0.1
PAX4O43316 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX4O43316 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.68■□□□□ 0.1
PAX4O43316 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PAX4O43316 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.68■□□□□ 0.1
PAX4O43316 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX4O43316 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PAX4O43316 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX4O43316 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.67■□□□□ 0.1
PAX4O43316 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX4O43316 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 AC241377.3-202ENST00000626088 1088 ntBASIC15.67■□□□□ 0.1
PAX4O43316 AC241585.3-202ENST00000628937 1088 ntBASIC15.67■□□□□ 0.1
PAX4O43316 AC245100.8-202ENST00000629247 1058 ntBASIC15.67■□□□□ 0.1
PAX4O43316 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PAX4O43316 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PAX4O43316 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX4O43316 AC138932.1-201ENST00000534164 6830 ntBASIC15.67■□□□□ 0.1
PAX4O43316 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX4O43316 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX4O43316 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PAX4O43316 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX4O43316 AC092171.4-201ENST00000609130 632 ntBASIC15.66■□□□□ 0.1
PAX4O43316 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.66■□□□□ 0.1
PAX4O43316 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.66■□□□□ 0.1
PAX4O43316 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX4O43316 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PAX4O43316 DUSP8P3-201ENST00000399571 1760 ntBASIC15.66■□□□□ 0.1
PAX4O43316 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PAX4O43316 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PAX4O43316 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PAX4O43316 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PAX4O43316 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.65■□□□□ 0.1
PAX4O43316 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.65■□□□□ 0.1
PAX4O43316 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PAX4O43316 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX4O43316 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PAX4O43316 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.65■□□□□ 0.1
PAX4O43316 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX4O43316 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.65■□□□□ 0.1
PAX4O43316 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX4O43316 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.65■□□□□ 0.1
PAX4O43316 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX4O43316 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PAX4O43316 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.64■□□□□ 0.09
PAX4O43316 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX4O43316 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX4O43316 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PAX4O43316 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX4O43316 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PAX4O43316 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.64■□□□□ 0.09
PAX4O43316 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.64■□□□□ 0.09
PAX4O43316 DUX4L4-201ENST00000566884 1269 ntBASIC15.64■□□□□ 0.09
PAX4O43316 AC009086.3-201ENST00000623486 1008 ntBASIC15.64■□□□□ 0.09
PAX4O43316 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX4O43316 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PAX4O43316 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms