Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.84■□□□□ 0.93
RRP8O43159 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RRP8O43159 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RRP8O43159 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RRP8O43159 FP325331.1-202ENST00000623531 1380 ntBASIC20.84■□□□□ 0.93
RRP8O43159 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RRP8O43159 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RRP8O43159 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RRP8O43159 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.83■□□□□ 0.93
RRP8O43159 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RRP8O43159 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RRP8O43159 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.83■□□□□ 0.93
RRP8O43159 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.83■□□□□ 0.93
RRP8O43159 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RRP8O43159 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
RRP8O43159 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.83■□□□□ 0.92
RRP8O43159 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.83■□□□□ 0.92
RRP8O43159 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
RRP8O43159 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RRP8O43159 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.82■□□□□ 0.92
RRP8O43159 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RRP8O43159 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RRP8O43159 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
RRP8O43159 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.81■□□□□ 0.92
RRP8O43159 BX005040.4-201ENST00000637145 1518 ntBASIC20.81■□□□□ 0.92
RRP8O43159 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
RRP8O43159 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RRP8O43159 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RRP8O43159 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RRP8O43159 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.8■□□□□ 0.92
RRP8O43159 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RRP8O43159 AC083906.2-201ENST00000511578 360 ntBASIC20.8■□□□□ 0.92
RRP8O43159 AC093827.2-201ENST00000512654 315 ntBASIC20.8■□□□□ 0.92
RRP8O43159 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.8■□□□□ 0.92
RRP8O43159 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RRP8O43159 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RRP8O43159 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
RRP8O43159 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.8■□□□□ 0.92
RRP8O43159 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
RRP8O43159 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.79■□□□□ 0.92
RRP8O43159 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RRP8O43159 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.79■□□□□ 0.92
RRP8O43159 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RRP8O43159 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
RRP8O43159 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RRP8O43159 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RRP8O43159 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 SLC29A4P1-201ENST00000398760 971 ntBASIC20.78■□□□□ 0.92
RRP8O43159 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.78■□□□□ 0.92
RRP8O43159 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.78■□□□□ 0.92
RRP8O43159 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.78■□□□□ 0.92
RRP8O43159 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RRP8O43159 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RRP8O43159 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RRP8O43159 TSPY6P-201ENST00000448518 926 ntBASIC20.77■□□□□ 0.92
RRP8O43159 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.77■□□□□ 0.92
RRP8O43159 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.77■□□□□ 0.92
RRP8O43159 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.77■□□□□ 0.92
RRP8O43159 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.77■□□□□ 0.92
RRP8O43159 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.77■□□□□ 0.92
RRP8O43159 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RRP8O43159 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.77■□□□□ 0.92
RRP8O43159 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RRP8O43159 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RRP8O43159 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RRP8O43159 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.77■□□□□ 0.91
RRP8O43159 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.77■□□□□ 0.91
RRP8O43159 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms