Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ABHD17AP4-201ENST00000411545 909 ntBASIC21.24■□□□□ 0.99
GSC2O15499 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GSC2O15499 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.24■□□□□ 0.99
GSC2O15499 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GSC2O15499 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.24■□□□□ 0.99
GSC2O15499 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GSC2O15499 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
GSC2O15499 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GSC2O15499 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GSC2O15499 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.23■□□□□ 0.99
GSC2O15499 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.23■□□□□ 0.99
GSC2O15499 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
GSC2O15499 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.23■□□□□ 0.99
GSC2O15499 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSC2O15499 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSC2O15499 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSC2O15499 LINC01521-201ENST00000504184 1943 ntBASIC21.22■□□□□ 0.99
GSC2O15499 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSC2O15499 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSC2O15499 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.21■□□□□ 0.99
GSC2O15499 AL592295.1-201ENST00000400984 884 ntBASIC21.21■□□□□ 0.99
GSC2O15499 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.21■□□□□ 0.99
GSC2O15499 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
GSC2O15499 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.21■□□□□ 0.99
GSC2O15499 AC007029.1-201ENST00000604183 313 ntBASIC21.21■□□□□ 0.99
GSC2O15499 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
GSC2O15499 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSC2O15499 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GSC2O15499 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GSC2O15499 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.2■□□□□ 0.98
GSC2O15499 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.2■□□□□ 0.98
GSC2O15499 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.2■□□□□ 0.98
GSC2O15499 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSC2O15499 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.19■□□□□ 0.98
GSC2O15499 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
GSC2O15499 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.19■□□□□ 0.98
GSC2O15499 MIR3648-2-201ENST00000581792 180 ntBASIC21.19■□□□□ 0.98
GSC2O15499 MIR3648-1-201ENST00000615959 180 ntBASIC21.19■□□□□ 0.98
GSC2O15499 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.19■□□□□ 0.98
GSC2O15499 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GSC2O15499 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
GSC2O15499 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSC2O15499 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GSC2O15499 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
GSC2O15499 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSC2O15499 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
GSC2O15499 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSC2O15499 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GSC2O15499 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GSC2O15499 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSC2O15499 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GSC2O15499 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
GSC2O15499 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
GSC2O15499 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.17■□□□□ 0.98
GSC2O15499 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GSC2O15499 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.17■□□□□ 0.98
GSC2O15499 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.17■□□□□ 0.98
GSC2O15499 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GSC2O15499 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GSC2O15499 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GSC2O15499 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.16■□□□□ 0.98
GSC2O15499 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSC2O15499 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSC2O15499 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSC2O15499 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSC2O15499 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms