Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCC4O15439 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCC4O15439 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCC4O15439 AC233992.3-201ENST00000607491 485 ntBASIC28.23■■■□□ 2.11
ABCC4O15439 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
ABCC4O15439 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCC4O15439 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.23■■■□□ 2.11
ABCC4O15439 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCC4O15439 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCC4O15439 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
ABCC4O15439 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCC4O15439 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.22■■■□□ 2.11
ABCC4O15439 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ABCC4O15439 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCC4O15439 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCC4O15439 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCC4O15439 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCC4O15439 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 BX842568.3-201ENST00000418104 571 ntBASIC28.21■■■□□ 2.11
ABCC4O15439 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ABCC4O15439 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.21■■■□□ 2.11
ABCC4O15439 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.21■■■□□ 2.11
ABCC4O15439 AL499627.2-201ENST00000606283 725 ntBASIC28.21■■■□□ 2.11
ABCC4O15439 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCC4O15439 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ABCC4O15439 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCC4O15439 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCC4O15439 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
ABCC4O15439 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCC4O15439 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
ABCC4O15439 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
ABCC4O15439 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.19■■■□□ 2.1
ABCC4O15439 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCC4O15439 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCC4O15439 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.19■■■□□ 2.1
ABCC4O15439 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.19■■■□□ 2.1
ABCC4O15439 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCC4O15439 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCC4O15439 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCC4O15439 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ABCC4O15439 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCC4O15439 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCC4O15439 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ABCC4O15439 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCC4O15439 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.18■■■□□ 2.1
ABCC4O15439 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.17■■■□□ 2.1
ABCC4O15439 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCC4O15439 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCC4O15439 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.17■■■□□ 2.1
ABCC4O15439 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCC4O15439 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.17■■■□□ 2.1
ABCC4O15439 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCC4O15439 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCC4O15439 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCC4O15439 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.17■■■□□ 2.1
ABCC4O15439 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCC4O15439 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ABCC4O15439 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCC4O15439 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCC4O15439 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCC4O15439 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCC4O15439 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCC4O15439 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCC4O15439 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCC4O15439 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCC4O15439 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.15■■■□□ 2.1
ABCC4O15439 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCC4O15439 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
ABCC4O15439 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
ABCC4O15439 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCC4O15439 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
ABCC4O15439 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCC4O15439 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
ABCC4O15439 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCC4O15439 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCC4O15439 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
ABCC4O15439 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCC4O15439 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.14■■■□□ 2.09
ABCC4O15439 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.14■■■□□ 2.09
ABCC4O15439 pRNA.6-201ENST00000610482 90 ntBASIC28.14■■■□□ 2.09
ABCC4O15439 pRNA.5-201ENST00000612139 90 ntBASIC28.14■■■□□ 2.09
ABCC4O15439 pRNA.11-201ENST00000618423 90 ntBASIC28.14■■■□□ 2.09
ABCC4O15439 pRNA.13-201ENST00000619112 90 ntBASIC28.14■■■□□ 2.09
ABCC4O15439 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCC4O15439 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCC4O15439 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
ABCC4O15439 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
ABCC4O15439 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms