Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.62■□□□□ 0.89
SNPHO15079 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SNPHO15079 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
SNPHO15079 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.62■□□□□ 0.89
SNPHO15079 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SNPHO15079 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.62■□□□□ 0.89
SNPHO15079 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNPHO15079 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.61■□□□□ 0.89
SNPHO15079 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
SNPHO15079 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.61■□□□□ 0.89
SNPHO15079 SRD5A1P1-201ENST00000442297 786 ntBASIC20.61■□□□□ 0.89
SNPHO15079 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.61■□□□□ 0.89
SNPHO15079 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.61■□□□□ 0.89
SNPHO15079 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNPHO15079 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.61■□□□□ 0.89
SNPHO15079 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
SNPHO15079 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SNPHO15079 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.6■□□□□ 0.89
SNPHO15079 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.6■□□□□ 0.89
SNPHO15079 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.6■□□□□ 0.89
SNPHO15079 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.6■□□□□ 0.89
SNPHO15079 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 AC233723.2-201ENST00000623798 2106 ntBASIC20.6■□□□□ 0.89
SNPHO15079 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNPHO15079 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SNPHO15079 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SNPHO15079 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.59■□□□□ 0.89
SNPHO15079 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SNPHO15079 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNPHO15079 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.58■□□□□ 0.89
SNPHO15079 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNPHO15079 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNPHO15079 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNPHO15079 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.58■□□□□ 0.89
SNPHO15079 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SNPHO15079 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SNPHO15079 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNPHO15079 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNPHO15079 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNPHO15079 C17orf82-201ENST00000623772 1530 ntBASIC20.58■□□□□ 0.88
SNPHO15079 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SNPHO15079 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNPHO15079 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.57■□□□□ 0.88
SNPHO15079 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
SNPHO15079 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.57■□□□□ 0.88
SNPHO15079 ABCB10P4-201ENST00000566803 2184 ntBASIC20.57■□□□□ 0.88
SNPHO15079 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SNPHO15079 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNPHO15079 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
SNPHO15079 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
SNPHO15079 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
SNPHO15079 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.56■□□□□ 0.88
SNPHO15079 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SNPHO15079 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
SNPHO15079 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SNPHO15079 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.56■□□□□ 0.88
SNPHO15079 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.56■□□□□ 0.88
SNPHO15079 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNPHO15079 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms