Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF11O14788 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF11O14788 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF11O14788 MIR939-201ENST00000401314 82 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 AC099791.1-201ENST00000416440 715 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 BX842568.3-201ENST00000418104 571 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 OR2I1P-207ENST00000453522 948 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 AC027682.1-201ENST00000562846 899 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 AC233992.3-201ENST00000607491 485 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 AL136967.2-201ENST00000623968 743 ntBASIC19.82■□□□□ 0.76
TNFSF11O14788 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFSF11O14788 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF11O14788 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF11O14788 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF11O14788 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TNFSF11O14788 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFSF11O14788 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TNFSF11O14788 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF11O14788 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF11O14788 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF11O14788 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF11O14788 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF11O14788 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF11O14788 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 AC019069.1-201ENST00000610008 1333 ntBASIC19.79■□□□□ 0.76
TNFSF11O14788 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
TNFSF11O14788 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 AC091305.1-201ENST00000479476 895 ntBASIC19.79■□□□□ 0.76
TNFSF11O14788 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFSF11O14788 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF11O14788 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF11O14788 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TNFSF11O14788 AC126544.1-201ENST00000580842 1059 ntBASIC19.78■□□□□ 0.76
TNFSF11O14788 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF11O14788 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TNFSF11O14788 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF11O14788 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF11O14788 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF11O14788 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF11O14788 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF11O14788 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF11O14788 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF11O14788 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TNFSF11O14788 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF11O14788 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.77■□□□□ 0.76
TNFSF11O14788 CA15P2-201ENST00000611168 834 ntBASIC19.77■□□□□ 0.76
TNFSF11O14788 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TNFSF11O14788 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TNFSF11O14788 RASA4CP-201ENST00000424092 1398 ntBASIC19.77■□□□□ 0.76
TNFSF11O14788 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF11O14788 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
TNFSF11O14788 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF11O14788 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF11O14788 C9orf163-202ENST00000624034 2573 ntBASIC19.76■□□□□ 0.75
TNFSF11O14788 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF11O14788 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF11O14788 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF11O14788 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF11O14788 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.76■□□□□ 0.75
TNFSF11O14788 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF11O14788 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TNFSF11O14788 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF11O14788 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF11O14788 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF11O14788 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TNFSF11O14788 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF11O14788 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TNFSF11O14788 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TNFSF11O14788 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms