Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SOX1O00570 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
SOX1O00570 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOX1O00570 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SOX1O00570 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.88■■□□□ 1.41
SOX1O00570 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SOX1O00570 CNN2P6-201ENST00000439038 900 ntBASIC23.88■■□□□ 1.41
SOX1O00570 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.88■■□□□ 1.41
SOX1O00570 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.88■■□□□ 1.41
SOX1O00570 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.88■■□□□ 1.41
SOX1O00570 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SOX1O00570 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
SOX1O00570 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOX1O00570 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SOX1O00570 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOX1O00570 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
SOX1O00570 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.87■■□□□ 1.41
SOX1O00570 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.87■■□□□ 1.41
SOX1O00570 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOX1O00570 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
SOX1O00570 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
SOX1O00570 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.87■■□□□ 1.41
SOX1O00570 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SOX1O00570 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.87■■□□□ 1.41
SOX1O00570 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SOX1O00570 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SOX1O00570 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SOX1O00570 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SOX1O00570 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SOX1O00570 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOX1O00570 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SOX1O00570 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SOX1O00570 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.86■■□□□ 1.41
SOX1O00570 AC211429.1-201ENST00000415277 523 ntBASIC23.86■■□□□ 1.41
SOX1O00570 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.86■■□□□ 1.41
SOX1O00570 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.86■■□□□ 1.41
SOX1O00570 AC128676.1-201ENST00000454392 318 ntBASIC23.86■■□□□ 1.41
SOX1O00570 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
SOX1O00570 AC008550.1-201ENST00000511500 884 ntBASIC23.86■■□□□ 1.41
SOX1O00570 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
SOX1O00570 AC006058.3-201ENST00000606217 1069 ntBASIC23.86■■□□□ 1.41
SOX1O00570 AC073912.3-201ENST00000624414 853 ntBASIC23.86■■□□□ 1.41
SOX1O00570 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SOX1O00570 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.86■■□□□ 1.41
SOX1O00570 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
SOX1O00570 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOX1O00570 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SOX1O00570 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SOX1O00570 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.85■■□□□ 1.41
SOX1O00570 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SOX1O00570 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.85■■□□□ 1.41
SOX1O00570 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SOX1O00570 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SOX1O00570 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.85■■□□□ 1.41
SOX1O00570 AC104187.1-201ENST00000607510 612 ntBASIC23.85■■□□□ 1.41
SOX1O00570 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SOX1O00570 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SOX1O00570 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX1O00570 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX1O00570 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX1O00570 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.84■■□□□ 1.41
SOX1O00570 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX1O00570 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SOX1O00570 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.84■■□□□ 1.41
SOX1O00570 MIPEPP3-201ENST00000412105 444 ntBASIC23.84■■□□□ 1.41
SOX1O00570 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.84■■□□□ 1.41
SOX1O00570 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.84■■□□□ 1.41
SOX1O00570 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.84■■□□□ 1.41
SOX1O00570 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.84■■□□□ 1.41
SOX1O00570 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.84■■□□□ 1.41
SOX1O00570 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SOX1O00570 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.84■■□□□ 1.41
SOX1O00570 ERN1-208ENST00000606895 2068 ntBASIC23.83■■□□□ 1.41
SOX1O00570 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SOX1O00570 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.83■■□□□ 1.41
SOX1O00570 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.83■■□□□ 1.41
SOX1O00570 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.83■■□□□ 1.41
SOX1O00570 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SOX1O00570 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.83■■□□□ 1.41
SOX1O00570 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.83■■□□□ 1.4
SOX1O00570 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SOX1O00570 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SOX1O00570 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SOX1O00570 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SOX1O00570 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.82■■□□□ 1.4
SOX1O00570 KRT18P21-201ENST00000515767 1272 ntBASIC23.82■■□□□ 1.4
SOX1O00570 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.82■■□□□ 1.4
SOX1O00570 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX1O00570 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.81■■□□□ 1.4
SOX1O00570 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms