Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MBD3L3A6NE82 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 KRT18P5-201ENST00000436075 1291 ntBASIC19.54■□□□□ 0.72
MBD3L3A6NE82 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 CCDC92B-201ENST00000575506 885 ntBASIC19.54■□□□□ 0.72
MBD3L3A6NE82 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 LINC02228-203ENST00000641970 1355 ntBASIC19.54■□□□□ 0.72
MBD3L3A6NE82 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3L3A6NE82 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.53■□□□□ 0.72
MBD3L3A6NE82 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 TERF1P2-201ENST00000583350 1212 ntBASIC19.53■□□□□ 0.72
MBD3L3A6NE82 AC087239.1-201ENST00000622671 572 ntBASIC19.53■□□□□ 0.72
MBD3L3A6NE82 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L3A6NE82 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L3A6NE82 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L3A6NE82 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L3A6NE82 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L3A6NE82 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L3A6NE82 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 AC010141.3-201ENST00000456659 717 ntBASIC19.5■□□□□ 0.71
MBD3L3A6NE82 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 KRT18P14-201ENST00000534205 1250 ntBASIC19.5■□□□□ 0.71
MBD3L3A6NE82 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3L3A6NE82 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L3A6NE82 AC092068.2-201ENST00000590491 1708 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms