Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MBD3L4A6NDZ8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 KRT18P5-201ENST00000436075 1291 ntBASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 CCDC92B-201ENST00000575506 885 ntBASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 LINC02228-203ENST00000641970 1355 ntBASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3L4A6NDZ8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 TERF1P2-201ENST00000583350 1212 ntBASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 AC087239.1-201ENST00000622671 572 ntBASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3L4A6NDZ8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3L4A6NDZ8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L4A6NDZ8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L4A6NDZ8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3L4A6NDZ8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3L4A6NDZ8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 AC010141.3-201ENST00000456659 717 ntBASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 KRT18P14-201ENST00000534205 1250 ntBASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3L4A6NDZ8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3L4A6NDZ8 AC092068.2-201ENST00000590491 1708 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms