Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC32.03■■■□□ 2.72
CCDC144AA2RUR9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.02■■■□□ 2.72
CCDC144AA2RUR9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.01■■■□□ 2.72
CCDC144AA2RUR9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC144AA2RUR9 NT5C3AP1-201ENST00000394500 1012 ntBASIC32■■■□□ 2.71
CCDC144AA2RUR9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32■■■□□ 2.71
CCDC144AA2RUR9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CCDC144AA2RUR9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32■■■□□ 2.71
CCDC144AA2RUR9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32■■■□□ 2.71
CCDC144AA2RUR9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 AC068587.7-201ENST00000641602 218 ntBASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC144AA2RUR9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 KRT18P14-201ENST00000534205 1250 ntBASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC144AA2RUR9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC144AA2RUR9 LINC02228-203ENST00000641970 1355 ntBASIC31.97■■■□□ 2.71
CCDC144AA2RUR9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC144AA2RUR9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 AC092068.2-201ENST00000590491 1708 ntBASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC144AA2RUR9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC144AA2RUR9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC144AA2RUR9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC144AA2RUR9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.95■■■□□ 2.71
CCDC144AA2RUR9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC144AA2RUR9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
CCDC144AA2RUR9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 TPRG1LP1-201ENST00000598702 760 ntBASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 ANOS2P-203ENST00000472227 1816 ntBASIC31.94■■■□□ 2.7
CCDC144AA2RUR9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC144AA2RUR9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 IKBKGP1-201ENST00000612193 1073 ntBASIC31.92■■■□□ 2.7
CCDC144AA2RUR9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
CCDC144AA2RUR9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC144AA2RUR9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC144AA2RUR9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms