Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AC120024.1-201ENST00000562672 995 ntBASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TRBV6-1A0A0K0K1D8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.52■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-1A0A0K0K1D8 LINC01529-204ENST00000636474 1715 ntBASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 LINC01960-201ENST00000563759 1884 ntBASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-1A0A0K0K1D8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 KRT18P24-201ENST00000344739 1156 ntBASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MIR4281-201ENST00000580852 62 ntBASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 THA1P-201ENST00000590384 1145 ntBASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CA15P2-201ENST00000611168 834 ntBASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC129492.7-201ENST00000622992 756 ntBASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC009086.3-201ENST00000623486 1008 ntBASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRBV6-1A0A0K0K1D8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms