Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 TSPY26P-201ENST00000476365 1326 ntBASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRBV11-1A0A0K0K1C0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRBV11-1A0A0K0K1C0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 IGHV3-19-201ENST00000521488 291 ntBASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRBV11-1A0A0K0K1C0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 IRS3P-201ENST00000223076 1006 ntBASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
TRBV11-1A0A0K0K1C0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 AP005435.1-201ENST00000529293 1178 ntBASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.41■□□□□ 0.86
TRBV11-1A0A0K0K1C0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV11-1A0A0K0K1C0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV11-1A0A0K0K1C0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV11-1A0A0K0K1C0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV11-1A0A0K0K1C0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV11-1A0A0K0K1C0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms