Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
LOC102724428A0A0B4J2F2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
LOC102724428A0A0B4J2F2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
LOC102724428A0A0B4J2F2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
LOC102724428A0A0B4J2F2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.5■■■□□ 2.15
LOC102724428A0A0B4J2F2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 ABHD17AP1-201ENST00000358206 933 ntBASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 AC006970.2-201ENST00000450065 779 ntBASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.49■■■□□ 2.15
LOC102724428A0A0B4J2F2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
LOC102724428A0A0B4J2F2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 KRT19P1-201ENST00000405746 1186 ntBASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 AL109923.1-201ENST00000618799 583 ntBASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.47■■■□□ 2.15
LOC102724428A0A0B4J2F2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.46■■■□□ 2.15
LOC102724428A0A0B4J2F2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
LOC102724428A0A0B4J2F2 AL355802.2-201ENST00000402069 882 ntBASIC28.46■■■□□ 2.15
LOC102724428A0A0B4J2F2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.46■■■□□ 2.15
LOC102724428A0A0B4J2F2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LOC102724428A0A0B4J2F2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
LOC102724428A0A0B4J2F2 NCF1B-203ENST00000435988 1254 ntBASIC28.45■■■□□ 2.14
LOC102724428A0A0B4J2F2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.45■■■□□ 2.14
LOC102724428A0A0B4J2F2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.45■■■□□ 2.14
LOC102724428A0A0B4J2F2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LOC102724428A0A0B4J2F2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
LOC102724428A0A0B4J2F2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 SMUG1P1-201ENST00000590640 811 ntBASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LOC102724428A0A0B4J2F2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LOC102724428A0A0B4J2F2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.41■■■□□ 2.14
LOC102724428A0A0B4J2F2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LOC102724428A0A0B4J2F2 AC011767.1-201ENST00000617410 1153 ntBASIC28.41■■■□□ 2.14
LOC102724428A0A0B4J2F2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.41■■■□□ 2.14
LOC102724428A0A0B4J2F2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LOC102724428A0A0B4J2F2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 AC068587.7-201ENST00000641602 218 ntBASIC28.39■■■□□ 2.14
LOC102724428A0A0B4J2F2 AC004687.1-201ENST00000579003 1625 ntBASIC28.39■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms