Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 AC133552.2-201ENST00000619106 1032 ntBASIC17■□□□□ 0.31
TRAV34A0A0B4J273 AC139530.1-201ENST00000575312 1977 ntBASIC17■□□□□ 0.31
TRAV34A0A0B4J273 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV34A0A0B4J273 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV34A0A0B4J273 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 AC131274.2-201ENST00000580697 1507 ntBASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV34A0A0B4J273 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV34A0A0B4J273 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 MIR639-201ENST00000384974 98 ntBASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV34A0A0B4J273 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRAV34A0A0B4J273 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV34A0A0B4J273 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV34A0A0B4J273 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV34A0A0B4J273 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV34A0A0B4J273 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 AC080038.3-201ENST00000623346 1952 ntBASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 AC018755.3-202ENST00000596210 929 ntBASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV34A0A0B4J273 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV34A0A0B4J273 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms