Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-2A0A0B4J237 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 FP325331.1-202ENST00000623531 1380 ntBASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-2A0A0B4J237 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 MIR4787-201ENST00000607364 84 ntBASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-2A0A0B4J237 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 AC087742.1-201ENST00000575880 1738 ntBASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 MTDHP2-201ENST00000601468 714 ntBASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-2A0A0B4J237 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 AC239859.2-201ENST00000444165 318 ntBASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 AC009102.2-201ENST00000606772 1639 ntBASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-2A0A0B4J237 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 DUX4L4-201ENST00000566884 1269 ntBASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 AC139530.1-201ENST00000575312 1977 ntBASIC16.68■□□□□ 0.26
TRAV8-2A0A0B4J237 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms