Protein–RNA interactions for Protein: A0A0A0MS05

TRBV5-7, T-cell receptor beta variable 5-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-7A0A0A0MS05 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC010980.1-201ENST00000587192 1142 ntBASIC19.13■□□□□ 0.65
TRBV5-7A0A0A0MS05 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
TRBV5-7A0A0A0MS05 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 LINC01960-201ENST00000563759 1884 ntBASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.11■□□□□ 0.65
TRBV5-7A0A0A0MS05 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 MIR4508-201ENST00000584178 70 ntBASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-7A0A0A0MS05 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-7A0A0A0MS05 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRBV5-7A0A0A0MS05 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-7A0A0A0MS05 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 AC009086.3-201ENST00000623486 1008 ntBASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-7A0A0A0MS05 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-7A0A0A0MS05 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-7A0A0A0MS05 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TRBV5-7A0A0A0MS05 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-7A0A0A0MS05 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-7A0A0A0MS05 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms