Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 AC093323.1-202ENST00000635031 2045 ntBASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 MIR6084-201ENST00000622012 110 ntBASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV23OR9-2A0A075B6M9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.52■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MIR5787-201ENST00000611784 55 ntBASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MIR6821-201ENST00000617625 74 ntBASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AC097381.1-201ENST00000429019 1296 ntBASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.5■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MIR572-201ENST00000384983 95 ntBASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AC092666.2-201ENST00000613287 246 ntBASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AP005435.1-201ENST00000529293 1178 ntBASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRBV23OR9-2A0A075B6M9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms