Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 SIGLEC22P-201ENST00000599104 714 ntBASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 AC011491.1-203ENST00000637688 543 ntBASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 AC006372.4-201ENST00000624122 1543 ntBASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 AC011481.3-201ENST00000623895 5594 ntBASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.45□□□□□ -0.42
AMBRA1Q9C0C7 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AL583805.1-201ENST00000391389 531 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 STK24P1-201ENST00000455035 1291 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 FTH1P22-201ENST00000456305 520 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC019193.1-201ENST00000506678 823 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SIGLEC18P-201ENST00000602271 909 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AC051619.9-201ENST00000623237 597 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SMCR5-201ENST00000543475 2844 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 Z97653.2-201ENST00000623057 1418 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 AIFM1P1-201ENST00000413342 1841 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LPP-AS2-201ENST00000605573 2852 ntBASIC12.44□□□□□ -0.42
AMBRA1Q9C0C7 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 CAP2P1-201ENST00000557743 1390 ntBASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.43□□□□□ -0.42
AMBRA1Q9C0C7 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms