Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 IYD-208ENST00000500320 2158 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 AC133919.3-201ENST00000621407 1804 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 TRIM80P-201ENST00000455685 2848 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC1A1P43005 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC1A1P43005 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC1A1P43005 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC1A1P43005 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC1A1P43005 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC1A1P43005 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC1A1P43005 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC1A1P43005 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC1A1P43005 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC1A1P43005 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 ACTBP9-201ENST00000587663 1099 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 AC005777.1-201ENST00000588332 187 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC1A1P43005 AL136982.5-201ENST00000605222 294 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 MIR6770-3-201ENST00000616362 60 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 MIR6770-2-201ENST00000618304 60 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 MIR6770-1-201ENST00000622248 60 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 AC120024.4-201ENST00000624285 2143 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 POM121L7P-201ENST00000329949 2404 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC1A1P43005 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC1A1P43005 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC1A1P43005 REXO1L1P-201ENST00000379010 6598 ntBASIC13.86□□□□□ -0.19
SLC1A1P43005 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC1A1P43005 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 AC034205.3-201ENST00000603595 1376 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 SNORA50D-201ENST00000408059 134 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 ACTG1P19-201ENST00000418987 1116 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
SLC1A1P43005 RN7SL23P-201ENST00000484055 275 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms