Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 AC003958.1-201ENST00000435883 421 ntBASIC11.84□□□□□ -0.51
APOC1P02654 KRT18P62-201ENST00000446618 1287 ntBASIC11.84□□□□□ -0.51
APOC1P02654 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC1P02654 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC1P02654 POLD4-208ENST00000532830 904 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC1P02654 BATF-202ENST00000555504 361 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC1P02654 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC1P02654 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC11.84□□□□□ -0.51
APOC1P02654 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC1P02654 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.84□□□□□ -0.51
APOC1P02654 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
APOC1P02654 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 LPP-AS2-201ENST00000605573 2852 ntBASIC11.84□□□□□ -0.51
APOC1P02654 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC1P02654 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC1P02654 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC1P02654 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC1P02654 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
APOC1P02654 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.83□□□□□ -0.51
APOC1P02654 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.83□□□□□ -0.51
APOC1P02654 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC1P02654 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
APOC1P02654 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC1P02654 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC1P02654 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
APOC1P02654 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 BX537318.2-201ENST00000624893 4162 ntBASIC11.83□□□□□ -0.52
APOC1P02654 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
APOC1P02654 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 CFL1P6-201ENST00000400899 494 ntBASIC11.83□□□□□ -0.52
APOC1P02654 HNRNPA1P33-201ENST00000421426 561 ntBASIC11.83□□□□□ -0.52
APOC1P02654 AC007274.2-201ENST00000421675 662 ntBASIC11.83□□□□□ -0.52
APOC1P02654 AC041040.1-201ENST00000425197 460 ntBASIC11.83□□□□□ -0.52
APOC1P02654 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 CHCHD2P9-201ENST00000461726 456 ntBASIC11.83□□□□□ -0.52
APOC1P02654 RN7SL564P-201ENST00000496309 250 ntBASIC11.83□□□□□ -0.52
APOC1P02654 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC11.83□□□□□ -0.52
APOC1P02654 HINT1-204ENST00000506908 681 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC1P02654 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 DNM1P51-201ENST00000558149 522 ntBASIC11.83□□□□□ -0.52
APOC1P02654 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC1P02654 AC244093.1-201ENST00000610837 814 ntBASIC11.83□□□□□ -0.52
APOC1P02654 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.83□□□□□ -0.52
APOC1P02654 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 AC007336.3-201ENST00000623886 2160 ntBASIC11.83□□□□□ -0.52
APOC1P02654 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 Z97653.2-201ENST00000623057 1418 ntBASIC11.83□□□□□ -0.52
APOC1P02654 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC1P02654 AC012313.8-201ENST00000595059 5402 ntBASIC11.83□□□□□ -0.52
APOC1P02654 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms