Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC243964.3-201ENST00000623022 2028 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC027369.3-201ENST00000530465 3707 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 HLA-DMA-202ENST00000395303 1007 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 DEFA8P-201ENST00000457582 285 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 MIR3147-201ENST00000577811 66 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AC011481.3-201ENST00000623895 5594 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 YAP1P1-201ENST00000401504 1393 ntBASIC11.67□□□□□ -0.54
NPIPB4C9JG80 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPB4C9JG80 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 AC004899.2-201ENST00000622993 3860 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 RNA5SP248-201ENST00000365602 127 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MIR33B-201ENST00000385104 96 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 HIST1H2APS2-201ENST00000454426 370 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 LINC00634-202ENST00000505157 222 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 HNRNPA1P7-201ENST00000521273 963 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms