Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 TPI1P3-201ENST00000335020 740 ntBASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 HNRNPA1P33-201ENST00000421426 561 ntBASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC004899.1-201ENST00000424687 1714 ntBASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 MIR3188-201ENST00000583494 85 ntBASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 EEF1DP1-201ENST00000585891 896 ntBASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 MIR770-201ENST00000390219 98 ntBASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AC093525.7-201ENST00000569852 3626 ntBASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RCL1Q9Y2P8 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RCL1Q9Y2P8 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.86□□□□□ -0.67
RCL1Q9Y2P8 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RCL1Q9Y2P8 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms