Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.25□□□□□ -0.13
SSR1P43307 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 AC018638.5-201ENST00000450885 754 ntBASIC14.25□□□□□ -0.13
SSR1P43307 PRSS3P1-201ENST00000503996 742 ntBASIC14.25□□□□□ -0.13
SSR1P43307 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.25□□□□□ -0.13
SSR1P43307 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 AC006453.1-201ENST00000636037 1257 ntBASIC14.25□□□□□ -0.13
SSR1P43307 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SSR1P43307 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC14.25□□□□□ -0.13
SSR1P43307 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSR1P43307 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC14.25□□□□□ -0.13
SSR1P43307 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 BX537318.2-201ENST00000624893 4162 ntBASIC14.24□□□□□ -0.13
SSR1P43307 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.24□□□□□ -0.13
SSR1P43307 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSR1P43307 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSR1P43307 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR1P43307 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 RN7SL375P-201ENST00000492442 298 ntBASIC14.24□□□□□ -0.13
SSR1P43307 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
SSR1P43307 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SSR1P43307 AC093300.1-201ENST00000510368 1201 ntBASIC14.24□□□□□ -0.13
SSR1P43307 PIGCP1-201ENST00000527583 895 ntBASIC14.24□□□□□ -0.13
SSR1P43307 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR1P43307 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR1P43307 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.24□□□□□ -0.13
SSR1P43307 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR1P43307 Z82244.1-201ENST00000631502 840 ntBASIC14.24□□□□□ -0.13
SSR1P43307 AC138627.1-207ENST00000641560 1006 ntBASIC14.24□□□□□ -0.13
SSR1P43307 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR1P43307 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR1P43307 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSR1P43307 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SSR1P43307 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms