Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 AC022400.8-201ENST00000623453 3599 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 KRT8P5-201ENST00000592443 1458 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
SLC1A1P43005 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SLC1A1P43005 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 HIST2H2BA-201ENST00000412169 381 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 SLC25A24P2-201ENST00000415059 510 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC13.88□□□□□ -0.19
SLC1A1P43005 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 AP003170.2-201ENST00000544730 786 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A1P43005 AL031713.1-201ENST00000564813 661 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A1P43005 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 NUDT4P2-201ENST00000578341 546 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 METTL23-211ENST00000589977 617 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A1P43005 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC1A1P43005 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 U62317.3-201ENST00000608319 855 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.88□□□□□ -0.19
SLC1A1P43005 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SLC1A1P43005 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC1A1P43005 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC1A1P43005 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC1A1P43005 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC1A1P43005 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC13.87□□□□□ -0.19
SLC1A1P43005 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC1A1P43005 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC1A1P43005 IGHJ2P-201ENST00000454480 60 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC1A1P43005 RN7SL769P-201ENST00000469386 295 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 CXXC1P1-202ENST00000489409 1212 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC1A1P43005 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.87□□□□□ -0.19
SLC1A1P43005 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.87□□□□□ -0.19
SLC1A1P43005 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 AC135983.4-201ENST00000564116 1262 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 RN7SL162P-201ENST00000579233 292 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 MIR3180-2-201ENST00000581748 88 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 RN7SL470P-201ENST00000583069 259 ntBASIC13.87□□□□□ -0.19
SLC1A1P43005 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC1A1P43005 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SLC1A1P43005 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms