Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RN7SL574P-201ENST00000581512 297 ntBASIC14.29□□□□□ -0.12
SSR1P43307 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.29□□□□□ -0.12
SSR1P43307 AC009560.1-201ENST00000620208 434 ntBASIC14.29□□□□□ -0.12
SSR1P43307 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.29□□□□□ -0.12
SSR1P43307 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.29□□□□□ -0.12
SSR1P43307 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SSR1P43307 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.29□□□□□ -0.12
SSR1P43307 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SSR1P43307 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
SSR1P43307 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.28□□□□□ -0.12
SSR1P43307 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
SSR1P43307 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.28□□□□□ -0.12
SSR1P43307 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSR1P43307 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 OR5BD1P-201ENST00000532527 817 ntBASIC14.28□□□□□ -0.12
SSR1P43307 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.28□□□□□ -0.12
SSR1P43307 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.28□□□□□ -0.12
SSR1P43307 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.28□□□□□ -0.12
SSR1P43307 KRT8P2-201ENST00000556193 944 ntBASIC14.28□□□□□ -0.12
SSR1P43307 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.28□□□□□ -0.12
SSR1P43307 AC132812.1-201ENST00000583145 892 ntBASIC14.28□□□□□ -0.12
SSR1P43307 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.28□□□□□ -0.12
SSR1P43307 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 AF254983.2-201ENST00000612331 135 ntBASIC14.28□□□□□ -0.12
SSR1P43307 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 AC091769.1-201ENST00000619576 568 ntBASIC14.28□□□□□ -0.12
SSR1P43307 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 AC026797.1-201ENST00000624837 2869 ntBASIC14.28□□□□□ -0.12
SSR1P43307 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSR1P43307 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR1P43307 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SSR1P43307 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SSR1P43307 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR1P43307 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 AP002008.2-201ENST00000635926 4870 ntBASIC14.27□□□□□ -0.12
SSR1P43307 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR1P43307 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR1P43307 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SSR1P43307 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SSR1P43307 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SSR1P43307 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SSR1P43307 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR1P43307 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR1P43307 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms