Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 AC060814.4-201ENST00000594169 2163 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 AC034205.3-201ENST00000603595 1376 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 RPL18AP16-201ENST00000424057 531 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 CCND3P1-201ENST00000438347 580 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR3DP05423 RPL35P1-201ENST00000450819 370 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.9■□□□□ 0.14
POLR3DP05423 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR3DP05423 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR3DP05423 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR3DP05423 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC15.9■□□□□ 0.14
POLR3DP05423 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR3DP05423 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR3DP05423 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
POLR3DP05423 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
POLR3DP05423 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 AC011477.7-201ENST00000617163 1440 ntBASIC15.89■□□□□ 0.13
POLR3DP05423 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR3DP05423 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
POLR3DP05423 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR3DP05423 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 MDC1-209ENST00000613547 830 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.89■□□□□ 0.13
POLR3DP05423 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR3DP05423 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
POLR3DP05423 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR3DP05423 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.88■□□□□ 0.13
POLR3DP05423 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
POLR3DP05423 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.88■□□□□ 0.13
POLR3DP05423 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
POLR3DP05423 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR3DP05423 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms