Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.19□□□□□ -0.14
O00370 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
O00370 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.19□□□□□ -0.14
O00370 DUX4L33-201ENST00000635217 958 ntBASIC14.19□□□□□ -0.14
O00370 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.19□□□□□ -0.14
O00370 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.19□□□□□ -0.14
O00370 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 AC139491.6-202ENST00000637171 2077 ntBASIC14.19□□□□□ -0.14
O00370 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.19□□□□□ -0.14
O00370 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
O00370 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
O00370 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
O00370 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC14.18□□□□□ -0.14
O00370 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
O00370 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
O00370 ZDHHC8P1-202ENST00000418264 1403 ntBASIC14.18□□□□□ -0.14
O00370 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
O00370 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
O00370 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.18□□□□□ -0.14
O00370 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AC104961.1-201ENST00000427605 771 ntBASIC14.18□□□□□ -0.14
O00370 ASS1P2-201ENST00000439895 1223 ntBASIC14.18□□□□□ -0.14
O00370 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 C2orf69P1-201ENST00000563532 1093 ntBASIC14.18□□□□□ -0.14
O00370 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC14.18□□□□□ -0.14
O00370 C2orf27AP1-201ENST00000618128 586 ntBASIC14.18□□□□□ -0.14
O00370 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.18□□□□□ -0.14
O00370 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
O00370 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.18□□□□□ -0.14
O00370 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 AC034205.3-201ENST00000603595 1376 ntBASIC14.18□□□□□ -0.14
O00370 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
O00370 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC14.18□□□□□ -0.14
O00370 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
O00370 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
O00370 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
O00370 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
O00370 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
O00370 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms