Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC9.88□□□□□ -0.83
NACAE9PAV3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC135983.4-201ENST00000564116 1262 ntBASIC9.88□□□□□ -0.83
NACAE9PAV3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 MIR7845-201ENST00000618396 99 ntBASIC9.88□□□□□ -0.83
NACAE9PAV3 MIR6727-201ENST00000620702 65 ntBASIC9.88□□□□□ -0.83
NACAE9PAV3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 AC074138.1-201ENST00000611182 1303 ntBASIC9.88□□□□□ -0.83
NACAE9PAV3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 GOLGA8UP-201ENST00000527159 1755 ntBASIC9.88□□□□□ -0.83
NACAE9PAV3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.88□□□□□ -0.83
NACAE9PAV3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC9.88□□□□□ -0.83
NACAE9PAV3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
NACAE9PAV3 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 MIR1307-201ENST00000408840 149 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC026320.2-201ENST00000434379 478 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC9.87□□□□□ -0.83
NACAE9PAV3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
NACAE9PAV3 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC010970.1-201ENST00000445125 1848 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC9.87□□□□□ -0.83
NACAE9PAV3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 FAM95B1-212ENST00000592873 4692 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 PES1P2-201ENST00000449745 1735 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 TEF-202ENST00000406644 4386 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms