Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AL513497.1-201ENST00000624273 2083 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-206ENST00000376090 689 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-209ENST00000376096 565 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-210ENST00000376099 610 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 GGTLC4P-201ENST00000402176 664 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 MIR1307-201ENST00000408840 149 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AL355334.1-201ENST00000417713 215 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-214ENST00000418507 726 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AC084752.1-201ENST00000509766 622 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AC007952.4-201ENST00000573866 637 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 MIR4265-201ENST00000582152 99 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AC124319.4-201ENST00000622931 2161 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 AC026992.2-203ENST00000563004 2419 ntBASIC13.78□□□□□ -0.2
SCG3Q8WXD2 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCG3Q8WXD2 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.77□□□□□ -0.2
SCG3Q8WXD2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SCG3Q8WXD2 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 AC097065.1-201ENST00000425737 517 ntBASIC13.77□□□□□ -0.21
SCG3Q8WXD2 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 EEF1DP2-201ENST00000433698 843 ntBASIC13.77□□□□□ -0.21
SCG3Q8WXD2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.77□□□□□ -0.21
SCG3Q8WXD2 RN7SL564P-201ENST00000496309 250 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms