Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.31□□□□□ -0.12
SSR1P43307 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SSR1P43307 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SSR1P43307 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.31□□□□□ -0.12
SSR1P43307 ERP29P1-201ENST00000442902 706 ntBASIC14.31□□□□□ -0.12
SSR1P43307 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.31□□□□□ -0.12
SSR1P43307 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.31□□□□□ -0.12
SSR1P43307 RN7SKP155-201ENST00000516031 288 ntBASIC14.31□□□□□ -0.12
SSR1P43307 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.31□□□□□ -0.12
SSR1P43307 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.31□□□□□ -0.12
SSR1P43307 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
SSR1P43307 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SSR1P43307 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC14.31□□□□□ -0.12
SSR1P43307 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 UBTFL8-201ENST00000426903 2112 ntBASIC14.3□□□□□ -0.12
SSR1P43307 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SSR1P43307 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.3□□□□□ -0.12
SSR1P43307 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 AL359091.4-201ENST00000610052 409 ntBASIC14.3□□□□□ -0.12
SSR1P43307 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSR1P43307 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSR1P43307 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SSR1P43307 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 CICP1-201ENST00000416803 2410 ntBASIC14.3□□□□□ -0.12
SSR1P43307 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSR1P43307 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 HSPA8P9-201ENST00000485881 1943 ntBASIC14.29□□□□□ -0.12
SSR1P43307 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.29□□□□□ -0.12
SSR1P43307 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.29□□□□□ -0.12
SSR1P43307 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSR1P43307 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.29□□□□□ -0.12
SSR1P43307 SSR4P1-201ENST00000415143 412 ntBASIC14.29□□□□□ -0.12
SSR1P43307 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.29□□□□□ -0.12
SSR1P43307 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.29□□□□□ -0.12
SSR1P43307 STK24P1-201ENST00000455035 1291 ntBASIC14.29□□□□□ -0.12
SSR1P43307 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.29□□□□□ -0.12
SSR1P43307 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.29□□□□□ -0.12
SSR1P43307 AC245884.6-201ENST00000515672 1067 ntBASIC14.29□□□□□ -0.12
SSR1P43307 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms