Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
GAPDHP04406 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
GAPDHP04406 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 AC245140.2-201ENST00000624054 1939 ntBASIC11.23□□□□□ -0.61
GAPDHP04406 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 PKP4P1-201ENST00000426801 2158 ntBASIC11.23□□□□□ -0.61
GAPDHP04406 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GAPDHP04406 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 AC106827.1-201ENST00000366454 431 ntBASIC11.22□□□□□ -0.61
GAPDHP04406 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC11.22□□□□□ -0.61
GAPDHP04406 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
GAPDHP04406 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 DKKL1P1-201ENST00000400550 698 ntBASIC11.22□□□□□ -0.61
GAPDHP04406 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC11.22□□□□□ -0.61
GAPDHP04406 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.22□□□□□ -0.61
GAPDHP04406 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 AC092573.1-201ENST00000433054 884 ntBASIC11.22□□□□□ -0.61
GAPDHP04406 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.22□□□□□ -0.61
GAPDHP04406 RN7SL81P-201ENST00000493781 261 ntBASIC11.22□□□□□ -0.61
GAPDHP04406 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC11.22□□□□□ -0.61
GAPDHP04406 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.22□□□□□ -0.61
GAPDHP04406 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC11.22□□□□□ -0.61
GAPDHP04406 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC11.22□□□□□ -0.61
GAPDHP04406 GAS7-216ENST00000583882 553 ntTSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 AC012073.1-201ENST00000606114 1108 ntBASIC11.22□□□□□ -0.61
GAPDHP04406 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
GAPDHP04406 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC11.22□□□□□ -0.61
GAPDHP04406 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GAPDHP04406 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
GAPDHP04406 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.21□□□□□ -0.61
GAPDHP04406 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC11.21□□□□□ -0.61
GAPDHP04406 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.21□□□□□ -0.61
GAPDHP04406 RCC2P5-201ENST00000492126 1487 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
GAPDHP04406 LPP-AS2-201ENST00000605573 2852 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
GAPDHP04406 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 PYY2-201ENST00000315776 282 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
GAPDHP04406 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC11.21□□□□□ -0.61
GAPDHP04406 CEP164P1-201ENST00000455142 418 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 UPF3AP2-201ENST00000457924 1132 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 CHCHD2P9-201ENST00000461726 456 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 RN7SL769P-201ENST00000469386 295 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 AC095040.1-201ENST00000513286 675 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 AC134698.3-201ENST00000523880 214 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GAPDHP04406 OR5BD1P-201ENST00000532527 817 ntBASIC11.21□□□□□ -0.61
GAPDHP04406 POLD4-208ENST00000532830 904 ntTSL 3 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms