Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 OR2T32P-201ENST00000403423 963 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC005077.3-201ENST00000449614 213 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 BICD1P1-201ENST00000457832 1222 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 DDX11L8-201ENST00000535849 366 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC104759.1-201ENST00000559109 939 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC106782.3-201ENST00000563429 258 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 MIR3940-201ENST00000579148 102 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC022966.2-201ENST00000587434 367 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC009779.7-201ENST00000609031 469 ntBASIC13.19□□□□□ -0.3
NCDNQ9UBB6 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.19□□□□□ -0.3
NCDNQ9UBB6 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC130686.1-201ENST00000622936 2466 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 RN7SKP255-201ENST00000363442 313 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 RN7SKP203-201ENST00000363618 332 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 RN7SKP71-201ENST00000364558 318 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 7SK.1-201ENST00000365328 331 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC010677.1-201ENST00000441690 412 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC007690.1-201ENST00000451924 468 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 RN7SL5P-201ENST00000581458 321 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 MIR1587-201ENST00000583319 53 ntBASIC13.18□□□□□ -0.3
NCDNQ9UBB6 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.18□□□□□ -0.3
NCDNQ9UBB6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms