Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 RNA5SP359-201ENST00000364838 113 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 GGTLC4P-201ENST00000402176 664 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 RNMTL1P1-201ENST00000454103 560 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 BNIP3P42-201ENST00000454982 569 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 NOP2-220ENST00000545915 630 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 MBP-238ENST00000580402 915 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 BNIP3P29-201ENST00000598302 571 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 BNIP3P13-201ENST00000599968 566 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC011447.5-201ENST00000616168 564 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 C2orf27AP1-201ENST00000618128 586 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB40CQ96S21 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 AC126564.1-201ENST00000623628 2013 ntBASIC10.87□□□□□ -0.67
RAB40CQ96S21 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB40CQ96S21 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 KRT8P18-201ENST00000413425 1445 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 DNM1P41-201ENST00000623634 3350 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PPP1R2P4-201ENST00000424051 595 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 DUX4L50-201ENST00000455245 715 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 SAA2-206ENST00000530400 323 ntTSL 3 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 RN7SL560P-201ENST00000577943 264 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 RN7SL163P-201ENST00000583100 276 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 AC132812.1-201ENST00000583145 892 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 AC009542.2-202ENST00000619004 1067 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 AC068587.8-201ENST00000641239 219 ntBASIC10.86□□□□□ -0.67
RAB40CQ96S21 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RAB40CQ96S21 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB40CQ96S21 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms