Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
SLC1A1P43005 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC1A1P43005 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.96□□□□□ -0.18
SLC1A1P43005 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLC1A1P43005 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.96□□□□□ -0.18
SLC1A1P43005 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC1A1P43005 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC1A1P43005 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC1A1P43005 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.96□□□□□ -0.18
SLC1A1P43005 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
SLC1A1P43005 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC1A1P43005 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.96□□□□□ -0.18
SLC1A1P43005 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC1A1P43005 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC1A1P43005 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 CHMP4BP1-201ENST00000556017 588 ntBASIC13.95□□□□□ -0.18
SLC1A1P43005 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLC1A1P43005 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC1A1P43005 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC1A1P43005 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC1A1P43005 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
SLC1A1P43005 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC1A1P43005 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC1A1P43005 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC019193.1-201ENST00000506678 823 ntBASIC13.94□□□□□ -0.18
SLC1A1P43005 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC1A1P43005 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms