Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TSPY25P-201ENST00000429463 745 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AC078875.1-201ENST00000431907 724 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 HLA-J-204ENST00000495278 958 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AL021707.6-201ENST00000609212 491 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 GARS-210ENST00000627489 324 ntTSL 4 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 Z82244.1-201ENST00000631502 840 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC10.96□□□□□ -0.66
RCL1Q9Y2P8 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 JAML-211ENST00000533261 1508 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 CFL1P6-201ENST00000400899 494 ntBASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 MIR4326-201ENST00000582203 59 ntBASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AL590483.3-201ENST00000623669 3580 ntBASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 AC018645.3-201ENST00000628855 2646 ntBASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RCL1Q9Y2P8 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms