Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSR3Q9UNL2 AL513497.1-201ENST00000624273 2083 ntBASIC11.95□□□□□ -0.5
SSR3Q9UNL2 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 UGT1A2P-201ENST00000454886 866 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 CTBP2P5-201ENST00000454986 1264 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AC007551.1-201ENST00000457394 519 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 COQ10BP2-201ENST00000513804 724 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 PES1P2-201ENST00000449745 1735 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SSR3Q9UNL2 AC008806.1-201ENST00000624962 2443 ntBASIC11.94□□□□□ -0.5
SSR3Q9UNL2 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 INO80-211ENST00000616814 4272 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AC067931.2-201ENST00000623655 2003 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AL627231.1-201ENST00000394467 1125 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 MIR1233-2-201ENST00000408138 82 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 MIR1233-1-201ENST00000408722 82 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 MIR3615-201ENST00000581999 87 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 MIR4326-201ENST00000582203 59 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AC106028.4-201ENST00000614509 607 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AP000346.4-201ENST00000614827 381 ntBASIC11.93□□□□□ -0.5
SSR3Q9UNL2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSR3Q9UNL2 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms