Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 U3.5-201ENST00000363448 216 ntBASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 FXNP2-201ENST00000411625 547 ntBASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 AC104784.1-201ENST00000473096 294 ntBASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 PIGCP1-201ENST00000527583 895 ntBASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RN7SL555P-201ENST00000584742 339 ntBASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC004241.5-201ENST00000623870 2448 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 FAM21EP-201ENST00000417804 985 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC136604.1-202ENST00000425471 771 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PSAT1P2-201ENST00000426107 972 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 MIR7845-201ENST00000618396 99 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PI4KAP2-201ENST00000360806 2080 ntBASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PARPBPQ9NWS1 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.03□□□□□ -0.48
PARPBPQ9NWS1 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms