Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLCN1P35523 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC15.27■□□□□ 0.03
CLCN1P35523 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN1P35523 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN1P35523 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 DCK-204ENST00000504952 2614 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN1P35523 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN1P35523 SERPINA13P-202ENST00000478994 924 ntBASIC15.26■□□□□ 0.03
CLCN1P35523 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 AC009779.1-201ENST00000551138 283 ntBASIC15.26■□□□□ 0.03
CLCN1P35523 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN1P35523 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN1P35523 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 AL353729.2-201ENST00000605859 1249 ntBASIC15.26■□□□□ 0.03
CLCN1P35523 AP000240.1-201ENST00000609910 452 ntBASIC15.26■□□□□ 0.03
CLCN1P35523 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CLCN1P35523 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN1P35523 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN1P35523 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCN1P35523 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN1P35523 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 LINC01815-202ENST00000641468 1409 ntBASIC15.26■□□□□ 0.03
CLCN1P35523 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN1P35523 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLCN1P35523 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCN1P35523 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 MIR1908-201ENST00000410394 80 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 BTG3P1-201ENST00000435859 716 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 RPS2P32-201ENST00000439199 892 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.25■□□□□ 0.03
CLCN1P35523 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCN1P35523 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 AC091271.1-201ENST00000611877 1162 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 AL033527.4-201ENST00000641026 673 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 HADH-210ENST00000626637 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms