Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CAPN2P17655 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN2P17655 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CAPN2P17655 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN2P17655 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN2P17655 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 AC008620.2-201ENST00000510294 1569 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15.5■□□□□ 0.07
CAPN2P17655 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 GULOP-201ENST00000454030 748 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 VDAC1P11-201ENST00000458323 852 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 AC112250.1-201ENST00000504640 745 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.5■□□□□ 0.07
CAPN2P17655 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPN2P17655 AC005746.3-201ENST00000614751 393 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 AC005865.2-202ENST00000635814 725 ntBASIC15.5■□□□□ 0.07
CAPN2P17655 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPN2P17655 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CAPN2P17655 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPN2P17655 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CAPN2P17655 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CAPN2P17655 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CAPN2P17655 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CAPN2P17655 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CAPN2P17655 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CAPN2P17655 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 SRPK2P-201ENST00000523408 1100 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN2P17655 AL359219.1-201ENST00000556311 934 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 MIR4640-201ENST00000581824 90 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 AP001462.1-201ENST00000594089 452 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPN2P17655 AC087072.1-201ENST00000603727 421 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 AC112220.4-201ENST00000604982 1263 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 AC010531.8-201ENST00000623341 685 ntBASIC15.49■□□□□ 0.07
CAPN2P17655 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.49■□□□□ 0.07
CAPN2P17655 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN2P17655 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.49■□□□□ 0.07
CAPN2P17655 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms