Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.93□□□□□ -0.5
APOC1P02654 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 ODCP-201ENST00000459650 1639 ntBASIC11.93□□□□□ -0.5
APOC1P02654 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
APOC1P02654 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC1P02654 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.93□□□□□ -0.5
APOC1P02654 CMC1-204ENST00000423894 549 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 PDIA3P2-201ENST00000428073 158 ntBASIC11.93□□□□□ -0.5
APOC1P02654 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 FTH1P22-201ENST00000456305 520 ntBASIC11.93□□□□□ -0.5
APOC1P02654 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC1P02654 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC1P02654 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.93□□□□□ -0.5
APOC1P02654 SNORD3B-1-201ENST00000577988 758 ntBASIC11.93□□□□□ -0.5
APOC1P02654 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 AC132812.1-201ENST00000583145 892 ntBASIC11.93□□□□□ -0.5
APOC1P02654 SIGLEC18P-201ENST00000602271 909 ntBASIC11.93□□□□□ -0.5
APOC1P02654 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 LINC00563-201ENST00000566370 1400 ntBASIC11.93□□□□□ -0.5
APOC1P02654 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC1P02654 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC1P02654 CICP7-201ENST00000432723 2477 ntBASIC11.93□□□□□ -0.5
APOC1P02654 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
APOC1P02654 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.93□□□□□ -0.5
APOC1P02654 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
APOC1P02654 AC005154.3-201ENST00000419639 1393 ntBASIC11.92□□□□□ -0.5
APOC1P02654 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC1P02654 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC1P02654 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
APOC1P02654 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
APOC1P02654 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
APOC1P02654 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC1P02654 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC1P02654 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms