Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 MIR1307-201ENST00000408840 149 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 IFNWP2-201ENST00000431203 580 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 GGNBP1-204ENST00000613113 887 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 MIR6816-201ENST00000620368 66 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AL928654.5-201ENST00000624831 2501 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AC073548.1-201ENST00000624088 1882 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 RCC2P1-201ENST00000452257 1476 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 AC061965.1-201ENST00000560524 1465 ntBASIC13.23□□□□□ -0.29
SATB2Q9UPW6 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SATB2Q9UPW6 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 OR10N1P-201ENST00000392758 869 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 DKKL1P1-201ENST00000400550 698 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 PGAM1P11-201ENST00000416729 680 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 SERBP1P2-201ENST00000436888 1164 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 TBC1D3P6-201ENST00000505954 962 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC092612.1-201ENST00000514501 998 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AL359219.1-201ENST00000556311 934 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC018846.1-201ENST00000568231 183 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 CR392039.2-201ENST00000623182 509 ntBASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.22□□□□□ -0.29
SATB2Q9UPW6 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms