Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 BAK1P2-201ENST00000532665 631 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AL118522.1-201ENST00000611368 560 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RN7SL736P-201ENST00000613111 269 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC026120.2-201ENST00000617239 309 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC137723.2-201ENST00000623540 398 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC138466.5-201ENST00000624002 808 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC114271.1-201ENST00000612689 2813 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TRIM80P-201ENST00000455685 2848 ntBASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 MPRIPP1-201ENST00000452433 1089 ntBASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.06□□□□□ -0.48
PARPBPQ9NWS1 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PARPBPQ9NWS1 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms