Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 FAM86MP-201ENST00000340703 885 ntBASIC11.95□□□□□ -0.5
APOC1P02654 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC1P02654 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 GPAA1P2-201ENST00000417923 928 ntBASIC11.95□□□□□ -0.5
APOC1P02654 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC11.95□□□□□ -0.5
APOC1P02654 AL592076.1-201ENST00000424448 303 ntBASIC11.95□□□□□ -0.5
APOC1P02654 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 SPTLC1P5-201ENST00000450718 252 ntBASIC11.95□□□□□ -0.5
APOC1P02654 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.95□□□□□ -0.5
APOC1P02654 BUD31-205ENST00000456893 512 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC1P02654 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC11.95□□□□□ -0.5
APOC1P02654 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.95□□□□□ -0.5
APOC1P02654 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 MIR4754-201ENST00000582477 89 ntBASIC11.95□□□□□ -0.5
APOC1P02654 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 AL359091.4-201ENST00000610052 409 ntBASIC11.95□□□□□ -0.5
APOC1P02654 AL591926.3-201ENST00000611630 238 ntBASIC11.95□□□□□ -0.5
APOC1P02654 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
APOC1P02654 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC1P02654 HNRNPLP1-201ENST00000421896 1501 ntBASIC11.95□□□□□ -0.5
APOC1P02654 AC006372.4-201ENST00000624122 1543 ntBASIC11.95□□□□□ -0.5
APOC1P02654 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
APOC1P02654 AC060814.4-201ENST00000594169 2163 ntBASIC11.95□□□□□ -0.5
APOC1P02654 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 CSPG4P13-202ENST00000567704 4801 ntBASIC11.95□□□□□ -0.5
APOC1P02654 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 PI4KAP2-201ENST00000360806 2080 ntBASIC11.95□□□□□ -0.5
APOC1P02654 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
APOC1P02654 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
APOC1P02654 MIR557-201ENST00000385239 98 ntBASIC11.94□□□□□ -0.5
APOC1P02654 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 ACTG1P2-201ENST00000415776 1125 ntBASIC11.94□□□□□ -0.5
APOC1P02654 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 ACTG1P11-201ENST00000425411 1125 ntBASIC11.94□□□□□ -0.5
APOC1P02654 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC11.94□□□□□ -0.5
APOC1P02654 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 AC012618.1-201ENST00000461223 412 ntBASIC11.94□□□□□ -0.5
APOC1P02654 AC092658.1-201ENST00000505836 891 ntBASIC11.94□□□□□ -0.5
APOC1P02654 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 AC024681.1-201ENST00000521917 487 ntBASIC11.94□□□□□ -0.5
APOC1P02654 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
APOC1P02654 AC138701.2-201ENST00000553634 226 ntBASIC11.94□□□□□ -0.5
APOC1P02654 AC104758.3-203ENST00000562938 2123 ntBASIC11.94□□□□□ -0.5
APOC1P02654 MBP-238ENST00000580402 915 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 AC009560.1-201ENST00000620208 434 ntBASIC11.94□□□□□ -0.5
APOC1P02654 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC11.94□□□□□ -0.5
APOC1P02654 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC1P02654 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC1P02654 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC1P02654 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms