Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 PEG13-201ENST00000631594 5667 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 DDX12P-201ENST00000432996 2947 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 DGCR9-201ENST00000609630 2415 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC11.97□□□□□ -0.49
ZIC3O60481 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 AL356653.1-201ENST00000402743 360 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 AC004522.1-201ENST00000419978 654 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC11.97□□□□□ -0.49
ZIC3O60481 AL929302.1-201ENST00000426556 871 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC11.97□□□□□ -0.49
ZIC3O60481 RPS15P5-201ENST00000449885 432 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 CISD2-202ENST00000503643 808 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 PRDX2P3-201ENST00000515779 586 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ZIC3O60481 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
ZIC3O60481 AC010202.1-201ENST00000551181 405 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 DUT-207ENST00000559416 635 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC11.97□□□□□ -0.49
ZIC3O60481 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 AL022344.2-201ENST00000568976 968 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 MIR4746-201ENST00000579802 71 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC11.97□□□□□ -0.49
ZIC3O60481 GGNBP1-204ENST00000613113 887 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ZIC3O60481 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ZIC3O60481 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ZIC3O60481 AC018445.4-201ENST00000624066 2291 ntBASIC11.97□□□□□ -0.49
ZIC3O60481 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZIC3O60481 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ZIC3O60481 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.96□□□□□ -0.49
ZIC3O60481 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC11.96□□□□□ -0.49
ZIC3O60481 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZIC3O60481 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ZIC3O60481 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms