Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC9.93□□□□□ -0.82
NACAE9PAV3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
NACAE9PAV3 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
NACAE9PAV3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.93□□□□□ -0.82
NACAE9PAV3 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
NACAE9PAV3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
NACAE9PAV3 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC9.93□□□□□ -0.82
NACAE9PAV3 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC9.93□□□□□ -0.82
NACAE9PAV3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 MCU-204ENST00000536019 3224 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AL583805.1-201ENST00000391389 531 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC9.92□□□□□ -0.82
NACAE9PAV3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 RN7SL530P-201ENST00000485097 298 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 MRPL22P1-201ENST00000505398 616 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC242376.1-201ENST00000559033 726 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 NRADDP-202ENST00000641269 1585 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC092978.1-202ENST00000637590 1327 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 DNM1P41-201ENST00000623634 3350 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
NACAE9PAV3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
NACAE9PAV3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AP000356.3-201ENST00000382243 753 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 STK24P1-201ENST00000455035 1291 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 AC008267.1-201ENST00000474858 1069 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 AC008723.1-201ENST00000506922 207 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
NACAE9PAV3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AL133467.4-201ENST00000602953 725 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 AC007881.3-201ENST00000608897 607 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC025262.2-201ENST00000623975 1056 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms