Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 RN7SL166P-201ENST00000489872 280 ntBASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 ST13P10-201ENST00000526466 1082 ntBASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AP000711.1-201ENST00000624964 917 ntBASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 C17orf80-204ENST00000426147 2075 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AL157996.1-201ENST00000624684 2299 ntBASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 HBA2-202ENST00000397806 513 ntTSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 RPL36AP29-201ENST00000415878 321 ntBASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 SRP14-205ENST00000559081 578 ntTSL 2 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 AC136618.1-202ENST00000561676 536 ntTSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC19.83■□□□□ 0.77
RIMBP3Q9UFD9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 MSNP1-201ENST00000511640 1732 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 MIR671-201ENST00000390183 118 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 AL357055.2-201ENST00000412567 434 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 CD24P1-201ENST00000422383 225 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 SUPT4H1P1-201ENST00000423067 340 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 RPL12P2-201ENST00000424565 493 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL394P-201ENST00000480997 291 ntBASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 AC096588.1-201ENST00000504537 558 ntTSL 3 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 AC007389.1-201ENST00000606978 1117 ntTSL 5 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC19.83■□□□□ 0.76
RIMBP3Q9UFD9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 CR383656.2-201ENST00000548656 2254 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 RN7SKP270-201ENST00000411297 312 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 RRM2P3-201ENST00000426279 1163 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 HNRNPA1P35-201ENST00000429216 963 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 AL365258.2-201ENST00000447479 472 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 SPATA3-208ENST00000455816 766 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 AC113410.2-201ENST00000507389 678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 TPI1P4-201ENST00000513630 473 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 IGHV3-25-201ENST00000518224 351 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 AC068189.2-201ENST00000518598 794 ntTSL 3 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 SAMD4B-206ENST00000596368 1176 ntTSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 AC023509.4-201ENST00000602306 775 ntBASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC19.82■□□□□ 0.76
RIMBP3Q9UFD9 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 SHC3-201ENST00000375831 569 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms