Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC125807.2-201ENST00000513358 3514 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CFAP58-201ENST00000369703 466 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CTBP2P7-201ENST00000593270 1244 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CICP17-201ENST00000418553 2377 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC011700.1-201ENST00000610409 2627 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 BHLHB9P1-201ENST00000553845 1651 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 RN7SL743P-201ENST00000475032 298 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC007992.1-201ENST00000513953 953 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 RN7SL644P-201ENST00000577919 259 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LRRC2-201ENST00000296144 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 RNA5SP324-201ENST00000365177 108 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 Z69706.1-201ENST00000595428 547 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC138907.9-201ENST00000623747 986 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC005682.1-201ENST00000452069 1467 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 KRT8P46-201ENST00000512037 1426 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms