Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.36□□□□□ -0.43
RFC3P40938 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RFC3P40938 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.36□□□□□ -0.43
RFC3P40938 AC073548.1-201ENST00000624088 1882 ntBASIC12.36□□□□□ -0.43
RFC3P40938 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 MIR497HG-202ENST00000572453 3838 ntBASIC12.35□□□□□ -0.43
RFC3P40938 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RFC3P40938 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
RFC3P40938 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 SNORD23-201ENST00000408876 110 ntBASIC12.35□□□□□ -0.43
RFC3P40938 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.35□□□□□ -0.43
RFC3P40938 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.35□□□□□ -0.43
RFC3P40938 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.35□□□□□ -0.43
RFC3P40938 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RFC3P40938 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RFC3P40938 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.35□□□□□ -0.43
RFC3P40938 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.35□□□□□ -0.43
RFC3P40938 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RFC3P40938 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.34□□□□□ -0.43
RFC3P40938 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 AC024075.2-201ENST00000598112 1473 ntBASIC12.34□□□□□ -0.43
RFC3P40938 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 AC020917.4-201ENST00000623994 1999 ntBASIC12.34□□□□□ -0.43
RFC3P40938 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RFC3P40938 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.34□□□□□ -0.43
RFC3P40938 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.34□□□□□ -0.43
RFC3P40938 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RFC3P40938 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.34□□□□□ -0.43
RFC3P40938 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.34□□□□□ -0.43
RFC3P40938 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.34□□□□□ -0.43
RFC3P40938 AL929302.1-201ENST00000426556 871 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms