Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP4S1Q9Y587 FAM99A-202ENST00000538190 1989 ntBASIC20.91■□□□□ 0.94
AP4S1Q9Y587 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 AL353803.4-201ENST00000565882 1934 ntBASIC20.9■□□□□ 0.94
AP4S1Q9Y587 AC087742.1-201ENST00000575880 1738 ntBASIC20.9■□□□□ 0.94
AP4S1Q9Y587 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 RPS2P7-201ENST00000447334 885 ntBASIC20.9■□□□□ 0.94
AP4S1Q9Y587 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 AC073130.3-201ENST00000624389 2278 ntBASIC20.9■□□□□ 0.94
AP4S1Q9Y587 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP4S1Q9Y587 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
AP4S1Q9Y587 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
AP4S1Q9Y587 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.89■□□□□ 0.94
AP4S1Q9Y587 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP4S1Q9Y587 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
AP4S1Q9Y587 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
AP4S1Q9Y587 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 AC022413.1-201ENST00000624602 984 ntBASIC20.88■□□□□ 0.93
AP4S1Q9Y587 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP4S1Q9Y587 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP4S1Q9Y587 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
AP4S1Q9Y587 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP4S1Q9Y587 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 AC005229.4-201ENST00000610085 2198 ntBASIC20.85■□□□□ 0.93
AP4S1Q9Y587 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4S1Q9Y587 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4S1Q9Y587 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms