Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IFT52Q9Y366 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.65■□□□□ 0.9
IFT52Q9Y366 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT52Q9Y366 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IFT52Q9Y366 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFT52Q9Y366 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT52Q9Y366 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 AC092028.1-203ENST00000608262 953 ntBASIC20.64■□□□□ 0.89
IFT52Q9Y366 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT52Q9Y366 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IFT52Q9Y366 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.63■□□□□ 0.89
IFT52Q9Y366 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.63■□□□□ 0.89
IFT52Q9Y366 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IFT52Q9Y366 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFT52Q9Y366 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFT52Q9Y366 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFT52Q9Y366 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.63■□□□□ 0.89
IFT52Q9Y366 ESRRAP2-201ENST00000418437 1549 ntBASIC20.63■□□□□ 0.89
IFT52Q9Y366 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
IFT52Q9Y366 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.62■□□□□ 0.89
IFT52Q9Y366 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
IFT52Q9Y366 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT52Q9Y366 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
IFT52Q9Y366 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IFT52Q9Y366 GUSBP5-202ENST00000510805 1989 ntBASIC20.62■□□□□ 0.89
IFT52Q9Y366 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT52Q9Y366 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT52Q9Y366 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
IFT52Q9Y366 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT52Q9Y366 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT52Q9Y366 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IFT52Q9Y366 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.61■□□□□ 0.89
IFT52Q9Y366 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
IFT52Q9Y366 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
IFT52Q9Y366 FP325331.1-202ENST00000623531 1380 ntBASIC20.6■□□□□ 0.89
IFT52Q9Y366 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.6■□□□□ 0.89
IFT52Q9Y366 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.6■□□□□ 0.89
IFT52Q9Y366 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.6■□□□□ 0.89
IFT52Q9Y366 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
IFT52Q9Y366 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT52Q9Y366 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
IFT52Q9Y366 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT52Q9Y366 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT52Q9Y366 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT52Q9Y366 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT52Q9Y366 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IFT52Q9Y366 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
IFT52Q9Y366 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT52Q9Y366 RARRES2P1-201ENST00000474487 481 ntBASIC20.58■□□□□ 0.89
IFT52Q9Y366 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.58■□□□□ 0.89
IFT52Q9Y366 MIR4787-201ENST00000607364 84 ntBASIC20.58■□□□□ 0.89
IFT52Q9Y366 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IFT52Q9Y366 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.58■□□□□ 0.89
IFT52Q9Y366 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
IFT52Q9Y366 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
IFT52Q9Y366 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.58■□□□□ 0.88
IFT52Q9Y366 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
IFT52Q9Y366 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
IFT52Q9Y366 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
IFT52Q9Y366 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT52Q9Y366 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT52Q9Y366 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT52Q9Y366 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
IFT52Q9Y366 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IFT52Q9Y366 MTDHP2-201ENST00000601468 714 ntBASIC20.57■□□□□ 0.88
IFT52Q9Y366 LINC01529-204ENST00000636474 1715 ntBASIC20.57■□□□□ 0.88
IFT52Q9Y366 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
IFT52Q9Y366 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms